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In Part 1 the basic data and archiving format are presented.
Similarly, the evolving COMBINE archive format has a large overlap in aims with the JSim project file and the authors might want to comment on any plans to make use of that archiving format or contributions in that direction.
Part 1 provided the archiving format and basic aerodynamic data.
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Once created, the specification project should be exported in JAR (Java ARchive) format.
Wherever possible, users are encouraged to submit models in COMBINE archive format (http://co.mbine.org/documents/archive).org/documents/archive
The DarwinCore Archive format also allows the sharing of occurrence records with GBIF and DarwinCore Archive compatible mapping services such as CartoDB (http://cartodb.com).
To share model and simulation descriptions together, we advise the use of the SED-ML archive format, described in the specification.
The program blastp version 2.2.28+ [ 50] was run with an expect value cutoff of 1x10-7 and output saved in BLAST archive format which was subsequently reformatted as XML and/or tabular text format using the program blast_formatter.
Occurrence data on specimens used in this study (in DarwinCore Archive format) and additional data sets (DNA sequence alignments) are available in the figshare repository (http://dx.doi.org/10.6084/m9.figshare.org/10.6084/m9.figshare
The resulting de novo assembled transcripts were locally searched against the non-redundant (nr) protein database using the BLASTx algorithm (e ≤ 0.001) implemented in the standalone version of the blast + tool [ 95] and stored in the BLAST archive format (ASN.1).
Fields that are not part of the OBIS Schema can still be shared with EurOBIS e.g. through the DarwinCore Archive format (32 )—but the corresponding data will at this time not be shown through the data portal.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com