By archiving software packages and data analyses as executable scripts, for example, all of the pipelines used in the publication of the SOAPdenovo2 genome assembler (18), this incentivizes reproducibility of software papers.
It contains everything from the C-Kermit and G-Kermit areas of our FTP site: sources, makefiles, scripts, binaries, tar and ZIP archives, install packages, text files, and the C-Kermit 7.0 Update Notes, all organized for easy access through your Web browser (but a Web browser is not required).
Natural Product Likeness scores [42] and estimated logP values were calculated with a standalone Java ARchive (JAR) package and ChemAxon's Calculator Plugins (JChem 6.0.4, 2013) respectively.
In late 2000, the project reorganized the archive with new package "pools" and created the Testing distribution, made up of packages considered stable, to reduce the freeze for the next release.
Save the root package archive folder to your computer's desktop.
These are ready to run archives for running SVMsle package.
We repeated all analyses using KEGG pathways [accessed through the KEGG.db Bioconductor package, which archives KEGG data from March 15, 2011 (Kanehisa and Goto, 2000)] in place of GO terms.
The manifest file, dex file, shared libraries, and some other resources are further packaged into a single zip-compatible archive file called Android Package Kit (APK).
The actor store is any data store which supports the hosting of packaged code archives (which is virtually all of them).
In WebELS Meeting online presentation implemented in Java, slide presentation files are converted into series of slide images, archived on a compressed package and stored on the server.
