Sentence examples for approximation interactions from inspiring English sources

As a first approximation, interactions presented in the native state (native interactions) dominate in processes such as protein folding and binding, resulting in a funnel-like energy landscape with minimal frustration [1] [3].

The simplest approximation of interaction potential between amino acid residues in proteins is the contact potential, which defines the effective free energy of a protein conformation by a set of amino acid contacts formed in this conformation.

To a first approximation, the interaction energies (per unit surface area of the nanotubes) are independent of the lengths and chiral indices, but dependent on the diameters of the component nanotubes.

In the framework of the self-consistent approximation, the interaction potential between adatoms separated by a distance r on the first layer counted from the substrate, reads (U_{1}=-int u_{1} r-r')x_{1} r-rmathrm {d}r'), where the integration is provided over the whole surface.

However as an approximation, the Interaction-Identifier method is still useful to analyze the biophysical properties of known TFs.

Equation‐based models such as ordinary differential equations, which typically provide averaged approximations of interactions occurring in well‐mixed space, can incorporate heterogeneity to some extent through parameter perturbation.

In this study, such a filter is proposed, based on the traditional Discrete Interaction Approximation (DIA) for the resonant four-wave nonlinear interactions.

Based on the analysis of the computational performances of LeVeque's linear approximation on wave interactions, a multi-wave approximation on rarefaction fan is proposed to avoid the occurrences of rarefaction shocks in computations.

The basic residues we identified as being important for Chd1 DNA binding are also generally conserved in ISWI proteins, and so our Chd1-DBD DNA model may be a good approximation of ISWI:DNA interaChd1-DBD DNA

To simplify the systems for MD in order to obtain a realistic approximation of the interactions of glucose with each phase, we designed the MD simulation systems to match the concentration of each component (either [C2mim]Cl in IL phase or NaOH in basic phase) to correspond to the experimental data.

The presented model uses Housner's two-mass approximation for fluid interaction and mass-spring-dashpot system for backfill interaction and accommodates a variety of features that may affect the behavior of rectangular tanks including fluid volume, backfill geometry, soil properties and flexible/rigid wall types.