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In the current study, using the sensitive bioinformatics approaches previously established by us in the studies on various kinomes [ 3, 5, 17, 20, 21] we have identified 587 putative protein kinases (PPKs) in chimpanzee and it corresponds to approximately 1.8% of the genome size.
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By applying the HS imaging and analysis approach we previously established, in this paper, we therefore quantify the spectral changes experienced in cellular environments by PEGylated AuNPs as compared with bare AuNPs and study how spectra are further impacted by serum concentration (0, 10, 25, or 50%% human serum).
This approach generalised the previously established laws of thermodynamics and explained existing observations and experiments in a better way than had been achieved previously.
We used genome organization as a novel approach that augments previously established criteria to mine for candidate virulence factors.
To trim potentially long branches and to verify the ability of the approach to recover previously established relationships among reference sequences, we added the consensus sequences for Alu elements specific to hominids (AluYa5, AluYa5a2, AluYb8, AluYb9, AluYc1, AluYc2, AluYd3, AluYd6, and AluYe5) [ 18, 30- 32, 35- 37].
The second objective of this work was to propose a new hybrid approach in which previously established time-varying and gestation-induced changes in the glomerular filtration rate (GFR) were leveraged into a population PK model for cefazolin, which may lead to a model with increased predictive value compared to an empirical model based only on the actual PK dataset.
The new approaches include DNA microarray fingerprints in algae [21, 22], a proteomic approach in zebrafish embryos previously established in adult fish tissue [23] to direct EDA, and a metabolomics EDA approach using invertebrate and fish cell lines in vitro.
This study builds on previously established approaches to transfect primary cells including islets using electroporation.
Each of these 1367 target genes was tested against 72 query genes in all pairwise knockdown combinations (2 × 2 dsRNAs), following previously established approaches (Casey et al., 2008; Horn et al., 2011; Laufer et al., 2013).
We tested several different methods: standard supervised analysis (PAM and GSEA, with local recurrence as the end point), profiles that have previously been used to predict distant metastasis and survival, and a combination of both approaches by supervising these previously established predictive profiles with clinical data on local recurrence.
Taken together, our comparative gene family classification approach could successfully reproduce previously established gene numbers of the ABC transporter C family in C. elegans, C. briggsae, and C. remanei.
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