Sentence examples for approaches alignment from inspiring English sources

We used covariance model approaches, alignment inspection and synteny to exhaustively identify miR-100/10 family homologues in representative sequenced genomes (supplementary Fig S1 online).

The two approaches, alignments and PCR, and de novo assembly, used in our study seems to be reliable methods for the experimental validation of the novel miRNA precursors.

It takes user defined peptide sequence and aligns it with each CPP using overlapping approach (alignment without gap).

In the first approach, alignment masking, potentially problematic columns and input sequences are excluded from from the dataset.

In the second approach, alignment subdivision, the missing data is statistically modelled in order to retain as many sequences as possible in the phylogenetic analysis.

For the parametric approach, alignments of the desired length were generated by simulating sequence evolution along the regional subtrees under a GTR + I + Γ4 model with Seq-Gen v.1.3.2 [ 91].

We used two different approaches to alignment (direct optimization and homology-extension alignment) and tree building (parsimony and ML), to illustrate the effect of very different data treatments.

At saturation voltage (Vs), the LC near the surface asymptotically approaches vertical alignment which results in the loss of the nanostructure's polarization dependence, as well as the bulk LC's birefringent properties.

Barnacle approaches the alignment selection problem heuristically.

Furthermore, using automated approaches to alignment avoids the problems of the investigator's bias and the lack of reproducibility that may be related to manual alignments [ 32].

For both the nonparametric and parametric approaches, sequence alignments of different lengths between 102 and 106 nucleotides were generated, with 100 replicate alignments per alignment length.