Sentence examples for applies an alignment from inspiring English sources

It takes a set of traces and applies an alignment procedure called binning [ 51- 54], which has a twofold effect.

Finally, we applied an alignment quality filter to the reads in U, discarding all alignments with a BLAST identity score lower than 95% and hs less than 80%.

The present study represents another effort of applying an alignment-free method in analysing complete genome data to elucidate the phylogeny of two virus groups of different genome size, the large dsDNA viruses and parvoviruses.

Despite that, our method (like many other genome aligners) applies a global alignment algorithm to all inter-anchor segments, navely assuming that homology exists.

This software applies an automated BlastX alignment of the sequences to the NCBI non-redundant database.

We applied an automated alignment procedure to compensate such variation in the exact position of peak signals.

We also apply a probabilistic alignment filtering method to remove erroneous alignments of unrelated sequences, which are commonly observed in other genome alignment methods.

In our study we have applied a careful alignment method using the synthetic standards to accurately align bands between gels to mitigate experimental variation.

Because alignment errors may affect the downstream substitution rate analysis, to check the robustness of our results, we also applied a different alignment strategy using PRANK (Löytynoja and Goldman 2005) and GUIDANCE (Landan and Graur 2008; Penn et al. 2010).

Two strategies were implemented to align these orthologous sequences using the global alignment algorithm – mlagan: 1) optimizing the alignment parameters and 2) applying a post-alignment filter.

In the first lattice construction algorithm, we apply a time alignment algorithm to the word-based phone lattices to remove the dictionary and LM constraints.