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An arbitrary 2-fold cutoff threshold was then applied to the lists of significant genes from the SAM analysis.
An automated unbiased analysis of published scientific literature was applied to the lists of differentially expressed genes described above using Genomatix/BiblioSphere software, as described in the Methods.
Hypergeometric tests, computed via the R library 'GOstats', were applied to the lists of significantly regulated probe-sets for a given tissue comparison.
Subsequently GO-gene set overrepresentation analysis using the hypergeometric (HG-) test is applied to the lists of genes contained in each of the overexpression spots (see the Methods section below).
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To convert any list back into unformatted text content, select the entire list and click the list button that's already applied to the list.
This is achieved by letting the user specify comparison criteria applied to the list of financial instruments he or she is considering.
So this is nothing more than apply of eval, quote, open, open, lambda of x, lambda of y, plus x y, three applied to, e0, applied to the list four bang.
Reducers are then applied to the list of values for each key to output a single value.
Once the screening criteria from Phase 2 are applied to the list of ecosystem service modeling tools in Table 2, the following table of appropriate tools was identified (Table 3).
Thus, interpretations of FARO results can be investigated by any systematic analysis that may be applied to the list of overlapping response genes.
A level 3 annotation of the biological process Gene Ontology terms was applied to the list.
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