Apart from the above mentioned query options, RETINOBASE also provides a user-friendly transcriptomic data visualization tool that was developed to allow retinal biologists to graphically analyse gene expression profiles across all the experiments.
Treatment of SH-SY5Y cells with RA resulted in induction of all regions under query with a 3-5-fold magnitude for most of them, apart from the primer pair 5 (Pri_5) querying the first two exons of UCSC LOC401022 isoform starting at the promoter region 1, which was induced only 2-fold.
Apart from posing queries, the audience also shared some relevant suggestions.
The Queries were set apart from the main text of the Opticks in order to underwrite their speculative nature.
Although ALBAYZIN evaluations could be similar in terms of speech nature to this NTCIR QbE STD evaluation (speech recorded in real workshops), ALBAYZIN evaluations do not provide any kind of information apart from the speech content, the list of queries, and the train/dev ground-truth files to participants.
Apart from the frame size, another significant part or field of a query is the session or read cycle number initiated by a reader.
Thus, quite apart from the debate around authenticity and process (yeah, but is it art?), is the query: wait, what?
Apart from the obvious advantage of speeding up optimization time, it also improves query execution efficiency, which makes it possible for optimizers to always run at their highest optimization level, as the cost of such optimization is amortized over all future queries that reuse these plans.
Apart from the database annotation of the assembled scaffolds these were also queried for intron length, intron distribution and gene density determination using AUGUSTUS v2.5.5 [ 68] with N. tabacum and S. lycopersicum as references.
In most of the cases, the false positives were hits which could not get associated with any PASS2-HMM, but did not associate with any other superfamily apart from query superfamily.
