The Blastn program uses 'blastmsdb' database, which is a blast compatible and created apart from the main database by using 'formatdb' program of blast package.
Performance of the ANN model was compared with statistical analysis using datasets that were kept apart from the original database.
Apart from the KEGG pathway database, we also used the Biocarta pathway database in the gene set enrichment analysis.
In contrast, tools with the objective to predict the energy consumption in production and disposal are not available apart from the first material databases, such as Eco Materials Adviser in Autodesk.
The link travel speed time series used in this study are organized in 3-min periods (480 values per link per day) and cover the whole period ranging from April 2008 to October 2011, for a total of 1,079 days effectively present in the database (apart from the incompletely measured days) and 517,920 speed values for each link.
One example of the potential for abuse is taking place elsewhere in California, where the district attorney of Orange County, Tony Rackauckas, has set up his own database, apart from the state's, which he can use as he pleases.
Although, apart from the NIST and PubChem, various databases are available, e.g., MassBank and more biologically oriented databases such as KEGG and HMDB, there is still an enormous need for development, improvement, and streamlining of databases for the identification of unknown compounds from various origins.
Moreover, apart from AAindex database, Chou's pseudo amino acid composition (PseAA) (Chou 2001) and its several variants, described in Nanni et al.
Apart from the comprehensive resources, highly specific databases have been developed for signal transduction processes such as PANTHER, GenMAPP or PID [ 48- 50].
