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The abundance of TEs near TSSs of P. patens and A. thaliana genes was assessed using publicly available genes and TEs annotations and a custom Perl script, which creates a histogram of scores relative to edges of entries from one annotation file based on the presence of entries from another annotation file.
In the bottom of the figure, there is another annotation for the code element resultSet.
To establish whether the results from the three categories were independent, we removed all SNPs that had a multiple annotation or were a proxy for any SNP in another annotation category.
Another annotation was performed where the sequences with salmonidae hits were excluded from the SGP dataset.
However, due to linkage disequilibrium, signals from one annotation may be present in another annotation.
Another annotation challenge can be found with pseudogenes, which are rare in Drosophila but do occur.
Similar(45)
A score close to minus one denotes that the object is most likely misclassified, i. e. transcriptionally affiliated to another but the annotated annotation value.
Snipd appears to be another web annotation service, one that allows users to "snip" page content such as images, videos, and text to share them with others and save for later.
Another notable annotation is that of YIL060W.
Another misleading annotation is the numbering of QSOX paralogs.
Another enrichment annotation of pattern I gene list is related to the protein synthesis and degradation.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com