Sentence examples for annotations to compute from inspiring English sources

Finally the computational predictions were compared against those annotations to compute the accuracy of each AFP method.

A recent example is the work of Youngs et al. (2013), who use information on GO annotations to compute priors for function prediction.

The last step combines the mapping output with the reference annotation to compute coverage across the annotated regions of the reference sequences, before writing the final quantification results back to the distributed file system.

Here, again, we propose to use ontology annotations, and to compute similarity between experiments based on these annotations.

When BioSim was applied using multiple annotation sources to compute the functional similarity of VAMP2 with each of the 18 076 human proteins in our study, SNAP25 achieved the top rank 1 with the strongest functional similarity.

Ensembl protein-coding gene annotations and GENCODE pseudogene v. 14 annotations were used to compute synthetic regions around splice junctions.

KEGG pathway and GO annotations were used to compute functional enrichment scores for all switch-like genes.

Clinical annotations were used to compute the duration of patient survival in months from the initial diagnosis to death or to the last follow-up.

KEGG pathway and GO annotations described above were used to compute functional enrichment scores for all switch-like genes.

The large number of annotations used here allowed us to compute term-centric metrics in addition to the protein-centric metrics used in CAFA.

Gene prediction, which is at the center of genome annotation, usually integrates various resources to compute consensus gene structures.