The phrase "annotations are represented in" is correct and usable in written English.
You can use it when discussing how annotations are displayed or formatted in a particular context, such as in a document or software application.
Example: "In this report, annotations are represented in a different color to distinguish them from the main text."
Alternatives: "annotations are displayed in" or "annotations are formatted in".
The figure suggests that genes associated with phosphorus metabolism can discriminate between the two types of lung cancer tumors, as this annotation is represented in 10 of the 30 iterations.
Database URL: https://github.com/bushlab/mynclist A typical genomic annotation is represented in the form of an interval (i.e. a range of base-pair positions), such as the boundaries of a gene.
When comparing in the opposite direction, we observed that 49% of the B2F-FAR annotations were represented as exact matches in the GOA, and an additional 13% of terms are provided as more specific concepts.
Networks N and N3 are represented in Figure 6 and their functional annotations detailed in Table S7 (additional file 2).
This table also describes the version of the assembly and annotation that is represented in the reported dataset and additional details on the protein-coding annotation results, statistical metrics that are commonly used to evaluate the quality of the assembly, and one measure (EST count) of the amount of same-species transcript data that was available for that annotation run.
Biological data, and particularly annotation data, are increasingly being represented in directed acyclic graphs (DAGs).
Although gene finding has improved in recent years, tiling arrays and deep sequencing have revealed that the level of transcription in most eukaryotic genomes often exceeds what is represented in existing annotation [ 45, 46].
The BAM file from each library was analysed with the BEDTools [ 44] software package, which provided counts of reads mapping to different gene products (transcripts) that were represented in the annotation file (GTF).
The top five sequence alignments (by bit score) for each isotig in an isogroup were compared and if a single gene appeared in all isotigs and was represented in the original annotation, it was assigned as the isogroup annotation.
