Sentence examples for annotation were made from inspiring English sources
Altogether, 1728 manual corrections of automated annotation were made using this approach (Table 1).
Putative assignments of the GO terms (Construction and content) referred to here as GO-GOA annotation were made for 30% of the SGP contigs and singlets, with almost 50% of the contigs returning GO-GOA hits.
For the peak and genomic feature overlap analysis, CDS, 5' UTR, 3' UTR and gene annotations in the v.1.1 annotation were made nonredundant using mergeBed, and introns delineated by subtracting the nonredundant CDS annotations from the "gene" set using subtractBed.
The automatic cluster annotation was made by a Perl script.
Current genome annotation was made by computational analysis based on gene prediction algorithms.
The annotation was made only for sequences translating to minimum of 50 amino acids in length.
Such an annotation is made to the root of the respective ontology to indicate which functional aspect is unknown.
However, the genome sequence annotation was made without experimental validation and little is known about the transcriptional landscape.
Each gene was analyzed independently, and the annotation was made according to these criteria; these data are shown in Additional file 1.
This is, however, how the original gene count, assembly and annotation was made due to the hybrid nature of the sequenced strain.
A genome sequencing project is underway for B. rapa, with sequences derived using a BAC-by-BAC strategy and with annotation being made publicly available http://brassica.bbsrc.ac.uk/.
