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Of 9 annotated marker genes (Aqp4, Gfap, Aldh1L1, Slc1a3, Olig2, Gad1, Dlx1, Nek7 and Gad2) for non-pyramidal cells (glial cells and inter-neurons), all were depleted in the Ntf3 cells.
Among the top ascending and descending monotonic genes for the ESCN data set (shown in Additional file 4: Table S1), we have found many well-known and annotated marker genes proven and reported in previous studies.
As was the case for growth-related QTL that were linked to SNP markers, direct assumptions of the role played by these two SNPs linked to stress-related QTL remain difficult, especially since the molecular function of the only annotated marker was not directly related to stress response.
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b A spot image of iodine 123 total body scan of the neck demonstrate a focus of abnormal radiotracer uptake at the left thyroid bed (Black arrows) between the annotated markers.
Functionally annotated markers (BLAST; E-value < 10-5): Sma-USCE7 (similar to Fibroblast Growth Factor Receptor Substrate 2; E-value < 2 × 10-14).
Functionally annotated markers (BLAST; E-value < 10-5): SmaUSC-E11 (Channele Channel 3; 2 × 10-19); Sma-USC7 (Insulin-like Growth Factor 1 Receptor; E-value: 0).
Functionally annotated markers (BLAST; E-value < 10-5): Sma-USC223 (4SNc-TuDomainmain Protein; E-value: 7 × 10-15); Sma-USCE7 (similar to Fibroblast Growth Factor Receptor Substrate 2; E-value < 2 × 10-14).
For the face alignment procedure, we used the manually annotated facial marker points in this experiment.
In addition to the five genes coding for subunits of the Mtr enzymatic complex, two former methanogenesis markers (annotated as methanogenesis markers 10 and 14 in the databases and belonging to arCOG00950 and arCOG04866, respectively) are absent from the three Methanomassiliicoccales genomes (Table 5).
The resultant annotated EST markers will then be of substantial value for marker-assisted introgression programs based on interspecific crosses using wild Cicer species that harbour agronomically valuable genes.
At least four genes encoding NBS-LRR proteins and four genes encoding protein kinases, all typical R proteins, were annotated between markers BM202 and ATA217 (see Additional file 3).
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