Sentence examples for annotated in the corpus from inspiring English sources

We have manually catalogued the annotated mutations and identified 118 mutation instances that are annotated in the corpus.

Larger drug molecules such as protein drugs had not been annotated in the corpus [16].

To further understand how each feature affects the recognition results, we evaluated their impact in terms of the different chemical entity classes annotated in the corpus.

Terms that do not strictly convey structural information but were nonetheless annotated in the corpus One heavy atom substituent 11 methyl Manually constructed Polymer 531 polyethylene glycol 8000 Manually constructed.

Among the terms that had a large effect on precision were basic English terms such as "In" (extracted 32367 times of which only 5 are annotated in the corpus as Formula) and "As" (extracted 7087 times of which 33 cases are annotated as Formula).

Some of the sentences of the BC-PPI dataset contained relations between proteins which had not been annotated in the corpus for not being a protein-protein interaction in the strict sense.

The dictionaries used to identify TRIVIAL, FAMILY, and ABBREVIATIONS in the relevant runs were built from a non-redundant list of the entities from each class annotated in the corpora provided by the BioCreAtIvE organizers, the SCAI corpora, and also by extracting the names of chemical entities from http://www.drugs.com/.com/

To make the three methods comparable, we ignore non-IUPAC entities that are annotated in the corpora when evaluating performance.

Both of the DDI and PK corpora contain only drug name annotations, whilst only metabolite mentions were annotated in the Metabolites corpus.

Database identifiers of compounds are one of the entity types annotated in the CHEMDNER corpus [21], e.g., LY541850 or AMN082.

Part (b) of this figure provides example cases of the top frequent chemical entity names annotated in the CHEMDNER corpus.