Sentence examples for annotated compendium from inspiring English sources

To improve transcriptional analysis in immunology, we created ImmuneSigDB: a manually annotated compendium of ∼5,000 gene-sets from diverse cell states, experimental manipulations, and genetic perturbations in immunology.

In brief, GENEVESTIGATOR is a high quality, manually curated and well annotated compendium of expression data collected from a variety of public repositories, including Gene Expression Omnibus [ 16] and ArrayExpress [ 17].

This might be expected as a result of labour-intensive experimental characterisation for single proteins, but this also requires mining and computational approaches that can better filter these compendiums, annotated and enriched with their corollary data types, much like those developed for the gene expression domain.

Transcript residuals resulting from this step are ranked by their absolute values for all annotated genes in the compendium.

An obvious global pattern instantly revealed by the heat map is that the nearly complete 334 NCR gene set is only expressed in nodules except for one experiment marked with the red arrowhead, which is a sample annotated in the MtGEA compendium as mycorrhizal roots but is contaminated with nodules (Additional file 2: Figure S1).

Founded in 2009 by three Yale graduates, Rap Genius bills itself as a "hip hop Wikipedia," a compendium of song lyrics annotated with notes on their meanings.

KEGG (Kyoto Encyclopedia of Genes and Genomes) is a compendium of databases covering both annotated genomes and protein interaction networks for all sequenced organisms.

The module-mapping method of Segal et al. identifies modules of co-expressed genes from microarray data based on co-expression within the compendium and co-membership in previously annotated gene sets [ 27].

Consequently, a compendium of putative intra and inter-chromosomal SV was annotated for each Oryza species that allowed further comparative exploration of their distribution, extent (frequency and quantity), and association with various genomic architectural features.

NCU09739 encodes a protein predicted to be a Zn II 2Cys6 type fungal transcription factor and is annotated as all development altered-7 (ada-7) in The Neurospora crassa e-Compendium.

With hundreds of thousands, and possibly millions, of followers, it is one of the most widely read mailing lists on the Internet — an evolving compendium of computer failures, flaws and privacy issues that he has maintained and annotated with wry comments and the occasional pun.