Sentence examples for annotated class from inspiring English sources

We also annotated class I LINE (Long Interspersed Nuclear Elements) and SINE (Short Interspersed Nuclear Elements) accounting for 9 13% and 0.9 3.4% of TE space, respectively (supplementary material S2: table S2 and fig. S2 a, Supplementary Material online).

Furthermore, the transcripts affected by GR QTL did not show any bias in functional annotation, suggesting that polymorphic GR is not limited to any particular annotated class of genes.

Similarly, ConoSorter was able to classify 894 conopeptides with an annotated class (specificity of 99.93%) with only 393 false positives (p-value = 0.07%).

The most dramatic differences between the results of searching annotated class I proteins and an unbiased search of the whole genome arose in the marsupials and monotremes.

In other cases, structural variation in the promoter was caused by insertions/deletions of DNA segments of variable length up to a few hundred nucleotides, which do not belong to any annotated class of repetitive elements.

Our data also show that 95% of the annotated class I peptides in this study were predicted to bind their respective HLA molecules with an IC50 ranging from 72 nM (for HLA-A01) to 5682 nM (for HLA-B51) at peptide-level FDR 1%.

Over 18 000 transcripts are presently annotated as lncRNA, and encompass previously annotated classes of noncoding transcripts including large intergenic noncoding RNA, antisense RNA and processed pseudogenes.

Detailed analysis revealed that the small RNA clusters indeed map to many well studied and annotated classes of lncRNAs, such as MALAT1, XIST, TUG1 and PTENP1.

To ensure consistent comparative analyses, we re-annotated class 2 TEs in Brachypodium distachyon, Oryza sativa (rice), Sorghum bicolor and Zea mays and assigned them to one of the five cut-and-paste superfamilies found in plant genomes (Tc1/mariner, PIF/Harbinger, hAT, Mutator, CACTA).

To investigate these relationships, we defined the domain architecture of each of the 5 members followed by collecting and annotating class A scavenger receptor mRNA and amino acid sequences from publicly available databases.

The TEs were identified, grouped, and annotated as class 1 (LTR, LINE), class 2 (MITE, TIR) or unknown TEs using the REPET pipeline and Repbase.