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Exact(13)
A total of 8,028 candidate loci predicted by SIPHT were annotated as potential UTRs (Table S1), including 4 (25%) of the 16 unconfirmed loci predicted and 17 (14%) of the 125 confirmed loci identified.
Sequences with terminal positions outside this window were annotated as potential deletion/extension errors.
As an exception, putative STE20 protein O24527/At1g69220 (TrEMBL database), from A. thaliana, is annotated as potential homologue of protein kinase SIK1.
The expression of T. hominis proteins related to known transporters, or annotated as potential transporters, is very heterogeneous within structural types.
In the largest cluster (APL_0488 to APL_0525), many genes are annotated as potential phage or prophage genes, suggesting that this cluster might correspond to a phage.
Coagulase-negative staphylococcus and other common skin contaminants were annotated as "potential contaminants" for both methods and excluded from the overall analysis, as previously described (13).
Similar(47)
All sequences were annotated as above.
Entries in the subcellular location that were annotated as "putative", "potential", "possible" and "by similarity" were eliminated to remove sequences with ambiguous and uncertain annotations.
Further the hit was annotated as a potential prophage locus and taken as a true positive if the annotation in protein table (ptt) file for the locus had phage associated genes.
We used the information in the reference multiple alignment to build a model of the protein family and sequences that deviated from this model were annotated as having potential sequence errors.
If the RNA editing site reduced the score of the ESE to below threshold value, it was annotated as a potential site that could disrupt activity at this ESE.
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