Sentence examples for annotated articles from inspiring English sources
Availability: A web-based tool for the automatic annotation of articles with CoreSCs and corresponding documentation is available online at http://www.sapientaproject.com/software http://www.sapientaproject.com also contains detailed information pertaining to CoreSC annotation and links to annotation guidelines as well as a corpus of manually annotated articles, which served as our training data.
The 252 annotated articles were used for evaluating new user interfaces reported in this study (described in more detail in user interface subsections below).
We randomly chose a subset of 121 articles from the total 252 annotated articles(gold standard collection mentioned earlier), created these four versions of the user interface for each of them, and then asked the authors to rank the user interfaces from most favorite to least favorite.
Many new terms were needed as the curators annotated articles in different physiological categories.
The classifiers were trained on 78 annotated articles and tested on a hold-out of 10 articles.
Despite our best efforts, we are only able to include 200 annotated articles in our corpus, which contains evidence text for only 1311 unique gene-GO term combinations.
However, once the system is installed, the parameters correctly set up, and the primary users trained, running batch processes to annotate articles is not difficult.
As curators annotate articles and find data that cannot be described with a current CMO, MMO or XCO term, they send a specific request to a single ontology editor.
Two different annotators annotated the 16 articles independently.
Expressed formally, let us consider drug-disease relationships, with scores X s, drug annotation levels X c and disease annotation levels X d, where the annotation level is the number of MeSH terms annotated to articles in MEDLINE for the drug or disease.
There were 138 warnings based only on Tumblr during this period, 56 (40.5%) could be aligned with a manually annotated news articles while 32 (23.1%) matched GDELT.
