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Peak lists (.pkl files) were generated using PeptideAuto in MassLynx 3.4 software (Waters), combining all sequential scans for the same precursor, centroiding data with a minimum peak width parameter of 2 and using a peak top parameter of 80%.
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Presence (1) or absence (0) of fragments were scored between 50 and 450 bp using a peak intensity threshold > 100 relative florescent units.
Laminate composition was characterised by optical microscopy and their cured shapes measured using a Peak Motus motion analysis system.
Systolic and diastolic blood pressures were determined using a peak detector.
The amplitude and frequency of sEPSCs were calculated using a peak detector function with a threshold amplitude set at 5 pA and a threshold area at 20 ms*pA.
A ChIP-seq peak is a genomic region (~100 to 500 bps for a typical transcription factor) enriched with sequence reads and identified using a peak-calling algorithm, e.g. [ 10, 11].
Track your asthma using a peak flow meter.
2 Put the egg whites in a squeaky-clean mixing bowl and, using an electric whisk, beat into soft peaks.
The pattern of DMRs found by both in this instance is likely very congruous, given the similar amount of genomic coverage of their DMRs (see Additional file 1: Figure S4), that they both define DMR bookends by CpG sites, and that they both use a peak-hunting heuristic.
The apparent dichotomy between small-headed mammals, which are thought to use a slope code, and owls, which are argued to use a peak-based, "local code" (i.e., a space map) for sound localization, was recently postulated by [42].
Peaks were picked automatically and curated manually using a restricted peak picking strategy.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com