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Close examination of the genomic region alignments showed that an insertion of new genetic material occurred some time after divergence of placental mammals and this inserted sequence was used for a new splice variant.
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Socrates keeps track of this inserted sequence and includes it in the output.
PApuro ratMEKK1 was generated by excising MEKK1 from the pCEP4HAMEKK1 vector and this insert was subcloned into the chicken actin promoter expression vector pApuro between Spe1 and Sal1 restriction enzymes sites in the polylinker.
According to the alignment, CBO0798 has a highly divergent central region containing a unique insert (residues ~135 360), and this insert region comprises a large portion of CBO0798's alignments with CNTs.
To examine the precise function of the NA stalk region in viral assembly, entry, and release, we deleted the 20-aa stalk segment from 09N1 to create 09N1-s60, and we inserted this s60 segment into AH N1 to create AH N1+09s60.
In 2005, You and three others, including Dodson, published on Auroraceratops and inserted this new dinosaur into their phylogeny.
He had written, "As Obama tries to deal with the crisis, he will get no help from Republican leaders," and after this she inserted the sentence "Worse yet, he'll get obstruction and lies".
We PCR amplified the mRelB sequence from this plasmid and inserted it into the pcDNA3.1-Myc/HisB vector (Invitrogen, Carlsbad, CA, USA).
Here, we examined the precise role of NA, and particularly its stalk region, in influenza A virus assembly, release, and entry, by deleting the 20-aa segment (residues 49 68) from the stalk region of 2009H1N1 NA, and inserted this segment, designated 09s60, into the stalk region of H5N1 NA.
To study the precise role of the neuraminidase (NA), and its stalk region in particular, in the assembly, release, and entry of influenza virus, we deleted the 20-aa stalk segment from 2009 pandemic H1N1 NA (09N1) and inserted this segment, now designated 09s60, into the stalk region of a highly pathogenic avian influenza (HPAI) virus H5N1 NA (AH N1).
A second test analyzed sequences of human influenza viruses that emerged from 2007 to 2009 by this approach and inserted their scores into the existing CA graphs.
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