Sentence examples for and the second alignment from inspiring English sources

If the ratio of correctly aligned bases between any such alignment and the second alignment was >0.8 and the subject regions didn't overlap, then that part was considered to be ambiguously mapped.

ED performed quality analysis of sequences and the first alignment for controlling the read mappability on the reference genome.

The "lookahead test" and the "third alignment going inwards" options were also selected for the genome processing in order to more stringently identify IR sequences.

The second alignment would increase the length of the road by 19.9 mile.

The second alignment method, MAFFT [27], was fully automated.

Hence, we prefer the second alignment as it creates the smallest visual distortion via maximum alignment.

The second alignment is based on RDP Infernal which allows secondary structure alignment [42].

The first alignment shown on the left keeps 18 areas contiguous whereas the second alignment shown on the right keep 22 areas contiguous.

The second alignment generates the standard bam which can be used for RNA quantification and variant detection.

Finally, the tools based on Direct fragmentation do not directly exploit paired-end information; they fragment every read before the first alignment and find fusion candidates aligning those fragments to a genomic reference.

When the RFLP and RAP2 sequences overlapped by >70% in the first alignment and the two sequences showed >70% identity, the physical position of the RAP2 transcript on the rice genome map was identified as the position of the RFLP marker.