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The accurate identification of SCEs is also important for the functions of BAIT which assemble and refine reference genomes (see sections below).
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The important thing, though, is that we would never have realized or have begun to understand this if we had not started from a hypothesis that all life did have a common origin which we could test and refine by reference to the structure of the living world around us.
The purpose of this challenge was to augment and refine the reference map in a species-specific manner using data-driven approaches.
To verify and refine the reference genome sequence, we applied paired-end high throughput short read sequencing to genomic DNA from the HdrR inbred line, to a median depth of 144× (see Materials and Methods for details).
This section provides detailed description of these categories, validated and refined through reference to other contexts.
The general results from the literature have then been validated and refined with reference to warehouse design companies.
This ability to discern which template strands were inherited by dividing cells can be used for a number of important applications including the high-resolution mapping of SCEs, analysis of genomic rearrangements, and refining of reference assemblies.
To make robust phenotypic calls, a reference range method was implemented that uses accumulated wild-type (WT) data to identify and refine the 95% reference range.
Moreover, it could provide the means for refining reference genome annotation and provide evidence of functionally conserved genes that were missed by current gene finding algorithms [ 25].
BAliBASE was the first large scale benchmark specifically designed for MSA, providing high quality manually refined reference alignments based on 3D structural superpositions.
All interviews were recorded, transcribed verbatim and analysed using NVivo 8. Felicity Callard coded all interviews; Emma-Louise Hanif and Jody Quigley participated in the earlier phases of coding to cross-reference and refine codes.
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