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(A) Heatmap and hierarchical clustering of CpG methylation levels measured within 1 kb of promoter regions.
In this paper, stochastic models of fault damage zones are generated by incorporating the statistical properties of fault populations (power law length and throw distributions, orientation distribution) and different spatial distributions, including randomly located, simple and hierarchical clustering of faults.
Many of these CYP, XME and transporter genes are regulated by xeno-sensing nuclear receptors, and hierarchical clustering of CAR/PXR-regulated genes demonstrated the similarities of toxicogenomic responses in liver between all four triazoles and in testis between myclobutanil and triadimefon.
A summary heat map and hierarchical clustering of gene expression patterns during the maturation of the culture is shown in Fig. 6.
Calculations of Tanimoto coefficients and hierarchical clustering of chemical structures based on Tanimoto coefficients was done using the NCBI portal to PubChem (http://pubchem.ncbi.nlm.nih.gov).nih.gov
Our strategy included smoothing CGH data using an appropriate denoising algorithm, extracting features via wavelets, quantifying the information via wavelet power spectrum and hierarchical clustering of the resultant profile.
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(A) Heatmap and hierarchical clustering analysis of gene expression profiles of hESC, hNSCs, and hCMs performed in triplicate.
Heatmap (left) and hierarchical clustering (right) of steroid metabolites featured in this study.
Expression data and hierarchical clustering analysis of all the samples were carried out using PermutMatrix 1.9.3, and shown with green-red gradient.
The relationships among relative expression profiles, a heat map summary and hierarchical clustering analysis of gene expression was performed using Permutmatrix [ 78].
Considering our set of grapevine varieties and according to the phylogenetic network and the hierarchical clustering of the VvNAC26 haplotypes, HGA and HGB show important differences.
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