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Statistical analyses were performed using the software SPSS, version 20 (Chicago, USA), and figures were made using the software GraphPad Prism 5 (San Diego, USA).
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Figures were made using the software program SigmaPlot (versions 7.0 and 11.0, SSPS Inc., Chicago, IL).
Figures were made using the PyMol program [57].
All figures were made using the PyMOL Molecular Graphics System, version 1.5.0.4 (Schrödinger, LLC).
Figure was made using the Generic Mapping Tools version 4.2.133 (http://gmt.soest.hawaii.edu/).edu/
The figures were made using PyMol [ 73].
Figures were made using PYMOL (www.pymol.org) and COOT (Emsley and Cowtan, 2004).
Figures were made using ALINE [21] and PyMOL [22].
All figures were made using GMT software (Wessel and Smith 1998).
Genome figures were made using Circos [ 36] and Mauve.
Circular visualization figures were made using BRIG (BLAST Ring Image Generator) [ 59] and linear visualization figures were made using Easyfig [ 50].
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