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poa was run in both default and global scoring mode (applying the command-line switch -do_global; henceforth referred to as poaglo) using the blosum80_trunc.
All analytical procedures took account of the multi-stage sampling design by using the svy family of commands in STATA and applying the sampling weights.
In this case we are using to apply the command to all datasets.
ACF were digitally excised from the image by selecting the transparent area outside the circumscribed borders using the magic wand tool and then applying the inverse command to select only the colored borders of the circumscribed ACF.
Maps of distance from faults and river were prepared by applying the distance command in spatial analyst extension of ArcGIS 10.2 and then classified into ten classes for both factors, respectively (Figs. 10, 11).
The log likelihood function derived from Eq. 7 was maximised by applying the craggit command (Burke 2009) on the IHS-transformed dependent variable and independent variables in Stata version 13 (Stata Corp).
Splitting data by applying the (filter) command is necessary to distribute the massive data load among nodes.
The solution of problem (7) can then be obtained by applying the MATLAB built-in command backsub for a back-substitution procedure.
We repeated the key rejection rate analysis using multilevel logistical regression (applying the xtmelogit command in Stata 11.0; StataCorp, 2009).
All analyses were carried out in Stata 11 and accounted for household clustering and non-response using survey weights and applying 'svy' commands in order to generate robust standard errors [ 31].
Participating doctors were the primary sampling unit, and we applied the survey commands of Stata (release 8).
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