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The manual sequence alignment has been improved by iteratively creating phylogenetic trees and adjusting the alignment.
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The Over app lets you take a photo or pull one from your camera roll, add whatever text you want, then choose from various different fonts and sizes, add tint, and adjust the alignment of the text.
We detected homologous fragments using DOTTER [ 39], made an alignment using CLUSTALW [ 40], and adjusted the alignment manually (available upon request).
Both the local realignment and BAQ procedures are designed to lower the SNP false-positive rate, one by adjusting the alignment and the other by adjusting the base quality score around indel regions.
After adjusting the alignment and bringing the transfer stack into contact with the exfoliated TMD flakes, these are picked up due to their higher adhesion to PC.
This implies that the Al Al3Ni eutectic growth may be capable of being controlled by adjusting the alignment of the Al3Ni eutectic phase and the heating flow extraction direction.
For example, the authors describe automated multiple sequence alignment programs as "a good starting point" for manually adjusting the alignment afterwards (p. 200).
The most difficult part might've been adjusting the alignment of the various stacked captures to compensate for stellar motion, which is the motion of stars across the night sky, and why you see star trails in unedited long exposure nighttime photography.
Most length variation could be accommodated by manually adjusting the alignment (File S1).
To improve the accuracy of the QSOX sequence logo, secondary structures were predicted using PSIPRED [ 28] and used to manually adjust the alignment in certain cases.
Once you open it, you'll see a YouTube-style menu that includes HTML, shortcode and the link, as well as a way to adjust the alignment and a view of of what the embed will look like.
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