Sentence examples for analyzing the alignment from inspiring English sources

Nucleotide diversity of Atlantys retrotransposons in different Oryza species was studied by analyzing the alignment of 137 Atlantys RT paralogs.

By analyzing the alignment parameters, two angular distributions (P(θ r ) and P(φ r )), and PDDCS00, we can get a view of the stereodynamical information of the title reaction.

SNVs and small indels that lie within the regions covered by synteny blocks are reported by analyzing the alignment information produced by LAGAN.

In the third stage, the main activities are analyzing the alignment efforts, asking for feedback, clarifying inconsistencies and sharing the resulting maps for learning, improvement and accountability.

Using SVDetect and analyzing the alignment files of the 1,481 NGS samples from the 1000 Genomes Project, 18,867,464 translocated fragment pairs were called.

By analyzing the alignment rate increase of OPTIMA compared to Gentig, a 1.5 to 2.9 times increase on average, we computed the corresponding cost reduction to be 33 66 %, with an average cost reduction of 54 % for relaxed filtering of data (r) and 49 % for stringent filtering (s).

Duplicate reads were removed from the data by analyzing the alignments to each UCSC transcript in the transcriptome reference.

Detection of mutations was done by analyzing the alignments, and genomic positions which were consistently (>60%, coverage of 5 or more reads) different were marked as mutated.

This assumption is further supported by analyzing the alignments (see below).

By analyzing the alignments of the positive hits, two PDCT homologs were identified (denoted as LuPDCT1 and LuPDCT2).

This is done by analyzing the alignments of all pairs of reaction paths (p, p′)∈ σ and by building a corresponding match-frequency matrix M whose rows and columns represent the reactions (hyperedges) of H1 and H2, respectively.