To understand protein structure within proline-rich domains, we recently analyzed the propensities of the 20 canonical amino acids to adopt the polyproline helix (PPII) conformation, via a host guest model system that was designed to understand the conformational preferences in a typical proline-rich sequence (Ac-GPPXPPGY-NH2, where X is any canonical amino acid).
Indeed, when analyzing the propensity of the different attractors to undergo attractor transitions (see Methods) we found that the attractors corresponding to the flower cell-types show a lower propensity that the Inflorescence attractors (see below).
Based on a sample of 1800 German manufacturing enterprises, we analyze the propensity to maintain different forms of R&D cooperation with customers, suppliers, competitors and public research institutions.
As the α-helical conformation predominates the postfusion structure, we also analyzed the helical propensity of influenza A/H3N2 and B virus HA2 in the region of residues 31 160 using COILS/PCOILS (http://toolkit.tuebingen.mpg.de/pcoils).
To this aim, we first systematically analyzed the CC propensity of Q4, A4 and QA4 proteins with Paircoil2 (27), an algorithm detecting CC heptad repeats in protein sequences (Fig. 1G I).
To overcome this inflexibility, three dynamic characteristics of amino acids and protein were introduced to analyze the crystallization propensity of proteins.
HPRD, Release 9 [ 21], with 9,673 nodes and 39,204 protein-protein interactions (PPIs), was used to analyze the targeting propensity of virus-encoded miRNAs.
We have further analyzed the normalized binding propensities of amino acid residues at conserved positions of E. coli, H. sapiens, S. cerevisiae, thermophiles and archaea in protein-RNA complexes.
We therefore analyzed the doublet propensities for each group (Fig. 4).
For this study, we surveyed consumer propensity to leave the home under CPP schemes and analyzed the impact of CPP on consumer cost.
