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The phrase "analyzed the differences in" is correct and usable in written English.
You can use it when discussing a comparative study or examination of various elements or factors within a specific context.
Example: "In her research, she analyzed the differences in consumer behavior between online and in-store shopping."
Alternatives: "examined the variations in" or "studied the distinctions in".
Exact(58)
Several studies have analyzed the differences in gene expression between different types of stem cells and identified signatures associated with stem cell populations as well as specific subsets of genes associated with particular types of stem cells [25], [26].
We analyzed the differences in amphibian assemblages and populations between habitats with different plant covers and different degrees of human intervention in northwestern Argentina.
Objective: We have analyzed the differences in the epidemiological characteristics of women with different Candida low female genital tract infection.
Firstly, we analyzed the differences in amino acid composition in each position between different samples for each patient.
We next analyzed the differences in overall substitution rate between dog and panda in different genomic regions (fig. 3 b).
We analyzed the differences in coding and concluded that they could be ascribed to the coders' different – medical and sociological – backgrounds.
In the present study, we analyzed the differences in gene expressions between human dental pulps exfoliated from deciduous and permanent teeth by DNA microarray assays.
However, in our study, we analyzed the differences in shape, not size.
We analyzed the differences in the baseline task performance between both groups and whether the outcome was related with baseline prefrontal functioning.
Similar(2)
First, we analyzed the difference in serum concentrations of miRNAs between the different ethnicities.
The second study, at Harvard, analyzed the difference in air bag risk to children under 13 based on the child's age, and found that their experience differed, too.
More suggestions(16)
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com