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We developed a RV extension of the generalized disequilibrium test (GDT) to analyze sequence data obtained from nuclear and extended families.
Full coding regions for fast type myosin heavy chain (MyHC) isoforms were sequenced from a porcine skeletal muscle to analyze sequence diversity relating to the contractile properties of muscle fibers.
We also used the DnaSP program (Ver 4.20, http://www.ub.es/dnasp/) to analyze sequence variations for the number of polymorphic sites and nucleotide diversity (π, the average number of nucleotide differences per site) of the Hd6 region within O. sativa varieties and O. rufipogon accessions [30].
To analyze sequence polymorphisms we created a pipeline that highlighted exon changes, indicated genes affected, and provided details of coding changes.
Another study used a Bayesian setting to analyze sequence diversity at 25 kb per individual in 30 individuals of African, Asian, and Native American origins [38].
To analyze sequence flanking 32996 hotspots we obtained equal amount of region (for a given hotspot) both on the telomeric and centromeric sides of the hotspot.
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With the protocol we were able to predict those high-affinity domain binders of the proline-rich peptides of human sacum in a high-throughput manner, and to analyze sequence-specific interaction in the domain peptide recognition at molecular level.
Help to analyze sequencing results.
We analyze sequences of reverts of article edits to Wikipedia, the largest online encyclopedia.
DNAStar Lasergene 8 software was used to analyze sequences.
S.S., J.F.G., T.M.P., B.G., R.D. and M.H. analyzed sequence data.
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