Sentence examples for analysis were removed as from inspiring English sources

The first 50,000 generations (5000 trees) from each analysis were removed as our "burn-in", and the remaining 60,000 trees were used to create a majority rule consensus tree.

In the ROIs appearing from this linkage analysis, possible Mendelian consistent errors were removed as well as the possible presence of linkage disequilibrium.

At each of these stages of analysis, markers were removed as before, to achieve maps within two mapping rounds and to ensure that all markers had a mean χ contribution of ≤ 2.0.

From further analysis, 3 samples were removed as there was not enough material to perform 5-layer measurements, and a total of 173 samples were thus included in multivariate data analysis.

For RP analysis, samples matching the two poor quality arrays were removed as this analysis utilizes the ranked expression values from replicate samples.

Following this analysis the first 500,000 iterations were removed as burnin and the remaining 950 trees were used to create a consensus tree in BayesTrees v1.3 (http://www.evolution.rdg.ac.uk/BayesTrees.html).html

For the Kruskal Wallis analysis, the four species with unknown pollinators were removed as they could not be assigned to any group.

In the Rasch analysis of the second domain, five items were removed as they were outside the limits established for infit and outfit values.

Each Bayesian analysis was run for 106 generations and 105 generations were removed as burn-in.

Microarray expression data were extracted using the Robust Multichip Average (RMA) method [ 17] and were analyzed using R. Prior to microarray analysis, one pair of male subjects was removed as one sample failed the quality control and was considered as an outlier using the distance distribution clustering analysis.

Sample GS033, from a hypersaline lagoon, and sample GS020, from a freshwater lake, were removed from analysis, as was sample GS025 (reef sample, different filter sizes).