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Phylogenetic analysis of the sequences will be conducted by the bioinformatics programs described above.
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Detailed analysis of these sequences will be reported as part of a separate study (R. Pelle et al. in preparation).
Another role for Bayesian analysis of influenza sequences will be the application of Bayesian phylogeographic methods on whole-genome sequence data (1 ).
In the next chapter, the "proximate causes of the accident sequence" will be presented, the analysis of the foam impact, the problems with foam shedding from external tanks and the extensive information collected from sensors and experiments after the accident.
A regression analysis of the number of clones sequenced per individual found that more individuals and sequences will be necessary to estimate true MHC variation per individual.
Experimental functional analysis of these sites and further attempts to shorten the mNUS sequence will be subject of future studies.
Analysis of the relative read depth suggests that exome sequencing will be useful for analysis of copy number variation.
For comparative genomic analysis, this first non-avian reptile sequence will be invaluable as an outgroup for comparative analyses of an increasing number of amniote sequences.
Further sequencing and analysis of the region will be required to elucidate the basis of this linkage finding.
Further sequencing analysis of the virus isolates will be necessary to characterize the strain of SWPV circulating in Brazil.
Further analysis of the potential MITEs will be facilitated by sequencing of bald cypress BACs and random genomic DNA.
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