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Hence precise analysis of the branches and angle of the branches with respect to each other is critical.
We undertook a classical clonal analysis of the branches of Tr2 and found evidence of coincident lineage and gene expression domains.
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Therefore, for the analysis of these branches, the affection status of the siblings needs to be varied.
The analysis of the branching of mammary glands in these mice showed similar pattern than myrAKT, without further progression towards the tumoral phenotype (Figure S4).
A detailed phylogenetic analysis of the branching enzymes was published by Deschamps et al. [ 14].
Quantitative analysis of the branching patterns revealed that the branch angles in Crk/CrkL mutant PC were approximately the same as those in reeler (Fig. S1a).
Based on the analysis of the branch length distribution within the phylogenetic trees of cyclins A, B, D and E, multicellular animals were divided into two monophyletic groups.
Our analysis of the branch b leading to P. horikoshii showed that the genes for transcription machinery were mainly subject to positive selection events (Table 3).
7) In the third paragraph of the subsection "Connectivity among the antennal grooming neuronal classes", based on the neuroanatomical analysis of the branching patterns of the described sensory and brain interneurons, the authors conclude specific connectivity between them.
While previous analysis of the branch containing HsZNT9 and AtMTP7 had this branch of sequences as an orphaned, ungrouped branch, in this analysis it is included with the Fe/Zn-CDF group, Therefore, this analysis suggests that these sequences be included into the Fe/Zn-CDF group.
Analysis of the branch-site model A was done using CODEML from the PAML package (PAML v. 4.2); models were compared using the Likelihood Ratio Test with 1 degree of freedom and, where significant, the posterior probability that a codon was under positive selection was estimated using the Bayes empirical Bayes (BEB) procedure [ 55].
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Justyna Jupowicz-Kozak
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