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IS performed the statistical analysis of simulation outputs and provided the artwork.
Analysis of simulation outputs is performed using the batch means method, where only one simulation run is executed.
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The next section describes the test data, the spatial individual-based models, perfect plasticity approximations, and the analysis of simulation output.
Calibration of the model was done through sensitivity analysis and comparison of simulation outputs and observed data.
Comparisons of simulation outputs with experimental observations, theoretical predictions and other simulation results are made.
This is further evidenced by our observation that students and beginners acquire neither adequate details of knowledge nor relevant experience of simulation output analysis in traditional classroom learning.
The goal is to provide an effective way to learn the implicit experience of simulation output analysis via an efficient interactive environment.
Thus, as its name suggests, output analysis focuses on the analysis of simulation results (output statistics).
For the analysis of the simulation output we have developed a classification of individual molecules which is based on presence/absence of catalytic domain, as well as on 5′- and 3′-dangling ends.
However, such non-coordinated development of software, force fields, and analysis tools for molecular simulations gave rise to an array of software formats and arbitrary conventions for routine preparation and analysis of simulation input and output data.
The ANGDelMut algorithm is executed in four steps, namely, mutation selection, implicit-solvent molecular dynamics simulation, analysis of simulation trajectory, and data output.
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