The phrase "analysis based on nucleotide" is correct and usable in written English.
It can be used in scientific or research contexts, particularly in genetics, molecular biology, or bioinformatics when discussing methods or findings related to nucleotide sequences.
Example: "The study conducted an analysis based on nucleotide variations to understand the genetic diversity within the population."
Alternatives: "nucleotide-based analysis" or "analysis utilizing nucleotide data".
These techniques have now been replaced by the in silico analysis based on nucleotide sequences.
We performed a phylogenetic analysis based on nucleotide sequences of protein-coding genes to better understand relationships within the Nemertea.
In total, 29 clones from all four studied species formed this lineage in NJ analysis based on nucleotide sequences of RT domain.
Phylogenetic analysis based on nucleotide and encoded amino acid sequences of the N gene confirmed that all field strains fell into two groups (Fig. 2).
Blastn and Blastp analysis based on nucleotide sequence or the corresponding amino acid sequence was performed in NCBI against Zea mays, rice or Arabidopsis.
This finding was further confirmed by phylogenetic analysis based on nucleotide and protein sequences of all 3 genome segments (representative trees shown in Figure 2).
Homology analyses of nucleotide and deduced amino sequences of llama IL-2, IFN-γ, IL-12p35 IL-12p402phylogeneticogenetic analysis based on their nucleotide sequences indicated the close relationship in these cytokine genes between llama and eutherian mammalian order Artiodactyla, which includes pig and cattle.
Homology analyses of nucleotide and deduced amino acid sequences of llama IL-4, IL-10 and IL-13 and phylogenetic analysis based on their nucleotide sequences indicated the close relationship in these cytokine genes between llama and eutherian mammalian order Artiodactyla (pig, cattle) and Perissodactyla (horse).
Phylogenetic analysis based on the nucleotide sequences showed different grouping of the HKT family genes as compared to the prevailing protein sequence based classification.
Phylogenomics analysis based on single nucleotide polymorphisms revealed a clear distinction between the clinical and environmental isolates.
Comparison of the gene arrangements and phylogenomic analysis based on concatenated nucleotide sequences of the 12 mitochondrial protein-coding genes revealed that species with closer relationships share more identical gene blocks.
