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The analyses were generated from the abundance data at the genus level.
Natural matings between B6 and CAST were used to generate F1 hybrid males for spermatozoa collection; all other F1 hybrid tissues used for bisulfite analyses were generated from natural matings between B6 and CAST12 mice.
The DNase accessible control datasets used in over-representation analyses were generated from DNase I hypersensitivity datasets (UW DNase: University of Washington) [ 42] downloaded from the UCSC ENCODE database [ 43].
RNA-Seq data for all analyses were generated from the same RNA reference sample (Human Brain Reference RNA) of the MicroArray Quality Control (MAQC) project (MAQC Consortium 2006; [ 43]).
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The phylogeny produced in the current analyses was generated from nine coding regions present in all members of the genus Orthopoxvirus as well as the members of the Poxviridae and would not be influenced by gene loss.
Input for the statistical analyses was generated from separate text files using a Perl script.
The phylogenetic tree used in the pgls analyses was generated from an alignment of 763 nuclear loci sequenced by a novel targeted enrichment method [ 64].
Extensive data from IDA analyses were generated and the IDA curves only for the severe MS-severe AS are plotted in Fig. 12.
All analyses were generated with SAS Statistical Analysis Software, Version 9.1.
Analyses were generated using SAS Version 9.1.
The analyses presented were generated from data collected in EDEMA0, EDEMA1®, EDEMA2®, EDEMA3®-DB, EDEMA3®-RD, EDEMA4® and DX-88/19 DX-88/19ients with an HAE attack with any abdominal symptoms.
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