Given the potential that this could be affecting our observations, we repeated our analyses in a high-quality subset of the A. thaliana interactome, containing only reliable interactions.
It now is feasible to perform orthogonal MPS concordance testing of whole mtDNA genome analyses in a high throughput, timely and cost-efficient fashion.
The results from the initial scan were followed up by LDLA analyses in a high-resolution map constructed for the casein region (73 SNPs) and using an extended number of families.
This is generally known as shotgun proteomics or liquid chromatography tandem mass spectrometry (LC MS/MS) which uses a combination of chromatographic steps prior to MS analyses in a high-throughput way.
Comparison of the latter with our findings by gene set enrichment analyses resulted in a higher coincidence with the systemic response than with the local response of infected udder quarters (data not shown).
Further development is required to enable unpurified blood samples to be analysed in a high-throughput scenario.
Bone mass and architecture of the midshaft humerus were analysed in a high-resolution micro-CT system (micro-Ct 40; Scanco Medical, Bassersdorf, Switzerland).
Large sets of proteins can be analysed in a high-throughput manner using the methods of proteomics (Carpentier et al., 2008).
Moreover, the prevalent cancers are included in their analyses, which results in a higher detection rate of cancer at the first screen.
Because our aim was to analyse samples in a high-throughput fashion, our protocols were optimised for processing large numbers of lines in parallel (Rees et al., 2011).
