The phrase "analyses based on sequence" is correct and usable in written English.
It can be used in contexts where you are discussing research, data interpretation, or methodologies that involve analyzing sequences, such as in genetics or data analysis.
Example: "The study presented several analyses based on sequence to determine the evolutionary relationships among the species."
Alternatives: "evaluations derived from sequence" or "assessments grounded in sequence".
Within the scope of ciliates, this finding provides direct evidence for the close evolutionary relationship between S. sulcatum and O. trifallax, and is much stronger than phylogenetic analyses based on sequence data for a single or a few genes.
Recent analyses based on sequence variation of the Cytochrome c Oxidase Subunit I (COI or cox1) mitochondrial gene have shown that the sexual Central Asian species, A. tibetiana, A. urmiana, and a sexual undescribed isolate from Kazakhstan [29] are closely related to each other and to A. parthenogenetica [16].
Sequence similarity network analyses, based on sequence similarity [ 30- 35] offer an extension to sequence clustering analyses.
Analogously to analyses based on sequence similarity, this case will be hard to distinguish from a degradation of sequence quality.
Comparative analyses based on sequence logos involved CheckAlign 1.0 [ 63] in Shannon's algorithm mode [ 64] and correction factor.
One of the main questions in phylogenomic analyses based on sequence information is the composition of the data set used.
Phylogenetic analyses based on sequences of genes A56R, B19R, E3L [18] and of ten genes related with virulence and host-range [20] demonstrated the existence of two well defined groups of BR-VACV [18], [20].
Resulting centroid sequences were used for downstream phylogenetic analyses based on sequences specific to the lemuriform families Cheirogaleidae (the dwarf and mouse lemurs) and Lemuridae (the true lemurs).
Early analyses based on sequences of eight typical Hsp70 proteins from yeast and other typical Hsp70 proteins from plants and animals, including one from humans, showed that typical hsp70 genes cluster in four evolutionary groups that are respectively characterized by expression in cytoplasm, ER, mitochondria or plastids [ 29].
Ensembl, NCBI, coliBase/xBase, CMR and Microbase integrate predominantly sequence data and provide comparative analyses based on nucleotide sequence similarities and orthologous proteins.
This phylogeny was also highly congruent with our previous analyses based on large sequence polymorphisms (LSPs) [33], [34], and earlier DNA sequencing work [8], [35].
