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The most noteworthy feature of the phylogram is that many of the clusters present in the AFLP analyses are retained in the ML tree.
The reciprocal top hits from each of the BLAST analyses are retained if they meet the following criteria, respectively: a minimum of 70% of the transcript length is aligned with a reference protein with at least 70% sequence similarity (BLASTX), and a minimum of 80% of the protein length is aligned to a transcript with at least 70% sequence similarity (TBLASTN).
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All determinants below the 0.10 significance level in the multivariate analyses were retained in the final model for heritability estimation.
Only those connections showing up in both types of analyses were retained.
The multivariable analyses allowed us to determine whether associations identified in the univariable analyses were retained after controlling for the sociodemographic and risk factor variables.
In addition, all covariates significantly associated with growth outcomes at the < 0.20 level in univariate analyses were retained for inclusion in multivariable analyses.
As in [ 8], only those random factors significant (LRT, p <0.10) in single environment analyses were retained in the multi-environment model.
Mother's prepregnancy weight, preterm delivery, and mother's height (for the children's height regression analyses) were retained in final models.
All predictors showing an association (p < 0.20, likelihood ratio test) with the outcome in the separate analyses were retained in the final multifactorial model, with a significance level of p < .05 (two-sided).
When subjected to multivariate backward elimination modeling, only six of the variables noted above from the univariate analyses were retained in the model together with one of the simultaneously added interaction terms (Table 2).
Inspection of the data showed that the variance between both groups was highly similar (in the above-cutoff and below-cutoff groups, the respective variances were 0.010 and 0.016 for Trails B/A ratio, and 0.001 and 0.001 for left HP volume), and therefore parametric analyses were retained.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com