Exact(1)
In both cases, an alternative sequence was predicted using the chicken sequence with Wise2 [ 27].
Similar(59)
In the case of exon 7, the 12-nucleotide alternative sequence was included in 80%% of the transcripts in whole adult brain and nearly all of the transcripts in the liver and kidney (~95 %).
If extra M alternative sequence is obtained, using this method, N + M alternative sequences will be generated.
Such an approach would require the specification of a model from which alternative sequences are drawn as well as null sequences.
Where alternative sequences were present in the same these were designated as a mixed genotype infection.
These alternative sequences are specific to B-raf as they are not conserved in the other vertebrate raf genes or in the unique raf ancestor gene in C. elegans and Drosophila.
In case of PGACL 8 : 92 and PLATMC 72 : 28, the value of TII was above 1, which means that longer alternative sequences are propagated in copolymers [ 35].
Notably, 26% of the two-cluster SNV's showed skewed signal intensities in the GoldenGate assay, indicating that the two alternative sequences are not present in equal dosages.
We have extended these analyses by asking whether a different Slou-preferred binding site would be sufficient for mib2 enhancer activity by substituting the wild-type Slou-preferred site for an alternative sequence that is also preferred by Slou when compared with other HDs (Slou-pref-alt; Fig. 6A).
As an alternative, sequencing transcriptomes is less complex and provides fast and cost-effective access to the gene expression profile of an organism [ 16, 20].
But intensive search for an alternative sequence of tRNA-Cys was not successful, so we stuck with this hypothesis although we cannot rule out that this is a non-functional sequence or subject to gene editing.
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