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Supplementary genes partially sequenced.
This practice also leads to false negatives because there is ample evidence that genes annotated as hypothetical are bona-fide genes [ 53].
Ample gene-expression data are publicly available.
This will become possible when we have ample gene expression data in a public domain.
In mixed populations and on shared hosts there appears to be ample opportunity for gene flow between reproductive modes.
Existing data mining tools [ 36- 38] collect information and provide ample annotation for predicted genes and gene products from scattered resources.
In total, 52 validated shRNAs showed potent silencing activity against 34 hEIR genes (Supplementary Table S6, Supplementary Figure S1A).
We performed gene set enrichment analysis (GSEA) and observe no enrichment for earlier upregulated genes (Supplementary Figure 7).
In this assay, we used PsXEG1266 (early expressed glucanase PAMP gene) and PsojNIP 27 (late expressed necrosis-inducing protein-coding gene) as marker genes (Supplementary Fig. 1c, d).
genes (Supplementary Table S1).
We confirmed T-DNA-indexed coding sequence of the AtPIP1 4 gene (Supplementary Fig. 5b) and also verified nullification of the gene expression in mutants (Supplementary Fig. 5c).
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