Sentence examples for alternative nucleotide from inspiring English sources

Thus, in order to be considered a putative SNP, the alternative nucleotide would have to be observed with high confidence at least twice even at a positions covered by 6 reads.

We used only mutational changes identified above to estimate the timeframe for the changes, and only synonymous substitutions as is traditional [17] [19], referring to them as synonymous SNPs (Single-Nucleotide Polymorphisms) as at each site there are 2 alternative nucleotide bases.

Allelic variants in a sub-genome will be fixed for one or the other alternative nucleotide.

To note, above 28%% of the reads mapping to position 15,735 carried the alternative nucleotide cytosine.

We identified 131,764 non-redundant polymorphic sites in the Ae. aegypti transcriptome with at least one alternative nucleotide than what is present in the current genome annotation.

Moreover, although SIL1 and HYOU1 are two alternative nucleotide exchange factors for BiP, only SIL1 has been associated with MSS (7, 8, 39).

Let us specify each SNP by the alternative nucleotides in the sense DNA-strand of allele A and allele B using the convention BA/BB, where BA/BB∈{A/C, A/G, A/T, C/G, C/T, G/T} stands for one of six SNP types considered on GeneChip SNP microarrays.

The common "+6nt" polymorphism was present in conjunction with the common missense variation noted above (i.e. T-T, and T-C) where T and C refer to alternative nucleotides in codons 71 and 112 defining the ovine SPRN types a and b (Figure 1, 2).

The remaining alternative nucleotides were considered as resulting from AS.

*The ' > ' symbol indicates a change from one nucleotide to another; a vertical line indicates alternative nucleotides.

The grey areas by definition were enriched in alternative nucleotides (supplementary table S1, Supplementary Material online).