Sentence examples for alteration data for from inspiring English sources

The DS-GPA is based on data from patients diagnosed between 1985 and 2005, and we set out to update it by incorporating more recently reported gene and molecular alteration data for patients with NSCLC and brain metastases.

Sequence mutation and DNA copy number alteration data for all TCGA GBM cases was obtained from the TCGA data portal [48].

To validate our analysis in a second cohort, we obtained processed LOH and somatic copy number alteration data for 47 high-grade serous ovarian tumors, which had been processed at Dana-Farber/Harvard Cancer Center (DF/HCC).

Users can use local models or obtain them from the Pathway Commons [ 11] database using advanced graph searches (neighborhoods, paths between molecules, or common targets/regulators) and overlay genomic alteration data from the cBioPortal for Cancer Genomics [ 12] or expression data from the Gene Expression Omnibus (GEO) [ 13].

DNA copy number alteration data by Affymetrix 6.0 SNP arrays were available for 466 cases.

For this analysis, we used the copy number alteration data to link unique genetic variants with epigenetic pathway status.

Genomic alterations of G6pd data for all TCGA cases were analyzed from TCGA data sets obtained from the cBioPortal for Cancer Genomics (http://www.cbioportal.org/public-portal/index.do).

This hypothesis is supported by the finding that lack of GNB1 causes a slightly different phenotype than that of PhLP1 or GNG1 [ 14] and the characteristic alterations in transcriptome data for a strain lacking GNB1, reflecting partially different targets.

Candidate somatic alterations were also assessed by visualizing sequencing data for each alteration using the Integrative Genomics Viewer (IGV; version 2.3.25) [ 41].

The authors also present solution chemistry and surface analysis data for alteration of these glasses, and postulate micro-cracks apparent in the gel layer of the altered glass to govern the extent of alteration.

Correlations were tested using the Pearson correlation analysis based on the data for alteration frequencies calculated based on the AFLP and MSAP variant frequencies and altered gene expression.