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The ethanol yield coefficient was therefore also expressed based on total sugars available in the reaction, as shown in parenthesis.
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Some of the genes that were highly amplified were also differentially expressed based on the expression analysis of frequently gained regions, so we also included genes with a log fold change greater than 0.6 (n = 17).
The economic parameters were expressed based on the system size.
Hence (20) is separately expressed based on two conditions.
Our body chooses what genes to express based on our environment.
Qualitative: While seniors were concerned about lack of age limits on license renewal by mail, they also expressed that licensing procedures based on age could be discriminatory (Kerschner and Aizenberg, 1999).
ORFs were also classified into highly expressed and non-highly expressed genes based on the codon adaptation index (CAI) calculated using CAIJava tool [ 52].
Clustering based on genes also showed that genes were expressed similarly based on functional category.
In H. roretzi, the β1, β2 and α1 chains are expressed on hemocytes [ 15] and it is noteworthy that the Ciona orthologues (Ci_α1 8 & β2 4) are also expressed predominantly in blood tissues based on EST analysis (data not shown).
In order to capture prominent functional patterns we also categorized the set of differentially expressed genes based on the presence of domains annotated according to Pfam classification [ 73] using the InterproScan software.
Pathway analysis was also performed on target genes of the differentially expressed miRNAs based on the KEGG database (http://www.genome.jp/kegg/).jp/kegg/
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