Pangenomes might allow different strains of V. cholerae to occupy different niches.
Further analysis allowed us to show that different strains of C. parvum, which had been isolated from either animals or humans, induced digestive neoplasia in this rodent model (Certad et al., 2012; Certad et al., 2010a; Certad et al., 2010b; Certad et al., 2007), even in infections that had been induced with very low inoculum sizes (one to ten oocysts) (Benamrouz et al., 2012).
The SYQ curve allows us to estimate the numbers of different strains of the same species, by using the cutoff of d ≤ 2 derived from Figure 4D.
Moreover, a significant amount of genomic information has been obtained for four different strains of this microorganism, allowing the development of both functional and comparative genomic analyses within the group.
The analysis of hybrids obtained from different strains of C. elegans allowed estimating the heritability of life-span to be between 20% and 50%.
This approach allows to incorporate coevolutive and competitive dynamics resulting from the different strains of HIV virus and different antigen recognition abilities by the immune system considered.
One advantage of our method is that it allows different phylogenetic groups to be handled automatically microbial genera, group of species or group of strains.
Although highly similar in their gene content, different strains of the same species may display gene rearrangements that allow them to develop different traits.
Having the ability to combine different strains of bacterial and fungal mutualists may benefit the ants, by allowing more flexibility for mutualist replacement after loss.
Our approach included three different strains of Ae. aegypti and a large number of mosquitoes/strain (90 mosquitoes per RNA-seq library), allowing sampling of 180 distinct haploid genomes for each strain.
Different strains of mice have variable CA repeat lengths and PCR based methods can be used to identify them, thus allowing for specific genotypes to be assigned.
