For the dataset reported in this article, all computation times were determined on Intel E5540 Xeon CPU at 2.53 GHz.
All of the chosen datasets reported genes differentially expressed compared to a normal reference except for Tothill et al. [16].
All datasets reported in this paper are available at the Gene Expression Omnibus with accession numbers GEO: GSE122463, GSE117611, GSE117409, and GSE107633.
However, all the datasets are assumed to be subject to the same selective reporting bias, i.e. the parameters w = (w1,.., wk) are the same for all datasets.
Although all datasets are reported to be representative of the UK population, this may not be the case and applying results from one dataset to another requires the assumption that the samples in each dataset were drawn from the same population.
The correlations for all 17 datasets are reported in Table 2.
Also, our dataset contains all the PP2C genes reported by them.
For all the studies reported below, we extended the datasets with pure compounds.
You can find all the datasets with the comparisons on Google Docs.
Of all the datasets that will be released, possibly the most significant is something called the Combined Online Information System (Coins).
