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Analysis of all the alignment results reveals that in all 75 families the bilinear correlation coefficients are statistically significant (p<0.01), though the median bilinear correlation coefficient is a little lower.
In all the iterations, all the alignment regions from each of the hit sequences were considered for further validation steps.
We align all the reference networks with the networks in our database, and store all the alignment mappings and scores.
In all, the alignment procedure uses 4 n+ n⌈log2 n⌉/8 bits, or n bytes for genomes <4 Gb.
For all the alignment of interests and calculation of the larger political currents, some Uzbeks said the feeling of support was remarkable, given the physical and psychological distance between the two nations.
A similar result was obtained when we analyzed all the alignment results (Table 2).
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During the bonding process, the depth was used as a reference to predict the bonding quality if all the alignments were good.
In general, while a strong signal was observed for all the alignment-free methods on the low GC-content group, a weaker signal was observed on the moderate GC-content genomes (supplementary table S3, Supplementary Material online).
Most alignments had 100% (25/25) or 96% (24/25) nucleotide identities, accounting for 93% of all the alignments.
We then average each of these statistics over all the alignments and present the results as a box plot.
In cases where contigs had multiple accurate alignments, possibly due to repeat regions or shared sequences between genomes, we counted each contig's contribution for all the alignments.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com