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Proteins with only 1 or 2 peptides identified were also included for consideration but the number of peptides identified for each protein is included in all supplementary data tables.
All supplementary data is available at.
The contents of all supplementary data are the sole responsibility of the authors.
The primary data is obtained in the main experiment whereas the secondary data includes all supplementary data about the analyzed subjects.
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The PMT response was calibrated using titration of a Pi standard according to Webb (2003) and was shown to be linear at all temperatures (Supplementary data; Supplementary Figure S2; Supplementary Table S1).
The ta-TRIMs of E. multilocularis were found dispersed in all chromosomes (supplementary data S2 and S5, Supplementary Material online), with no detectable compositional bias in the surrounding regions.
Species were clustered in the avian families Accipitridae, Mimidae, and Columbidae which had the highest relative influence compared to all other families (Supplementary Data file 2).
Bayesian analysis of clock models using BEAST shows that relaxed molecular clock models are the likeliest for all genotypes (see Supplementary Data) and these were used for the construction of Bayesian skylines on sub-genotypes B5 and C4.
Acceleration of speciation is observed across all larger orders (Supplementary Data 4), suggestive of an external underlying cause, such as climate change or nutrient availability, instead of clade-specific events.
We mapped and processed the data identically for all genomes (see Supplementary data).
ERβ+ ECs were readily detectable in all uterine layers (Supplementary data, Fig. S1B).
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