The phrase "all samples were compared" is correct and usable in written English.
It can be used in contexts where you are discussing a study, experiment, or analysis involving multiple samples that have been evaluated against each other.
Example: "In the study, all samples were compared to determine the effectiveness of the new treatment."
Alternatives: "all samples were analyzed" or "all samples were evaluated".
We employed CNV-seq to identify DNA copy-number variations using a threshold of twofold increase or decrease compared with control.23 As not all of the samples had paired normal tissue, all samples were compared with the paired histologically confirmed uninvolved lymph node (normal tissue) from case 1.
All samples were compared to each other visually and using UPLC-QTOF as described below.
All samples were compared to the untransformed Δku70 wild-type strain at 0 h (Fig. 4a d).
The position and intensities of the diffraction peaks of all samples were compared with standard α-sulfur particle diffraction pattern [30].
In the present study all samples were compared with both Indian and WHO-recommended limit for NO3 in the drinking water.
Therefore, all samples were compared to a reference RNA sample.
ROIs with modest signal representation were excluded (i.e., mean across all samples being compared <20 counts), which is akin to traditional non-specific filtering.
PIA depends on two variables: the error rate of the genotype data (E) and a pairwise haplotype difference matrix (H) for all samples being compared.
There was a strong general agreement that it is necessary to perform a complete characterization of all samples being compared and to fully describe this information, including counting rules, when publishing the results of a study.
This procedure was permutated 100 times with replacement and the average bit score over all samples was compared between the two DEG lists for each species using the Welch t-test.
In any case, when an asterisk is used on the bar graphs, it should be clarified what is being compared with what, either with a description in the legend or by using a horizontal bar between the relevant control and the experimental case (e.g. Figure 2: are all samples being compared with the left hand (white) double heterozygote control?).
